Exonization Plots


Real-time screening for reads of alternative exonizations based on a multi-organ and -developmental stages from 313 human transcriptome RNAseq data. A collaboration with the Henrik Kaessmann lab.

  • Exonization
  • Customized

Exonization shown cases were screened prior on the server, the whole process will finish in seconds.

The customized approach screens 313 RNAseq datasets for your input regions. This process takes about 1 min. For the best results, key regions of alternative splicing should be carefully selected (see below) How to select the fitting set of coordinates?

Main plot

How to use the tool?
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Save cpm table as tsv Save main plot as pdf
Save UCSC custome track


Further Readings:
Zhang, Fengjun, et al. ExoPLOT: Representation of alternative splicing in human tissues and developmental stages with transposed element (TE) involvement. Genomics 114, 110434 (2022).
Cardoso-Moreira, Margarida, et al. Gene expression across mammalian organ development. Nature 571, 505-509 (2019).